HM13-AS1

Across TCGA patient cohorts, HM13-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,135 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible HM13-AS1-associated GO terms across cancer lineages are Methylation, Macromolecule methylation, and tRNA modification. Each is linked with HM13-AS1 in more than 19 cancer types. Because this analysis shows association rather than direction, both HM13-AS1-to-partner and partner-to-HM13-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Methylation grouped by HM13-AS1-low versus HM13-AS1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HM13-AS1→partner) and Y-score (partner→HM13-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Methylation →	+0.030	+0.236	<.001	<.001	3	20
STAD	Macromolecule methylation →	+0.032	+0.249	<.001	<.001	3	20
UVM	tRNA modification →	+0.032	+0.356	.001	<.001	2	20
ACC	Inner mitochondrial membrane organization →	+0.048	+0.471	<.001	<.001	3	19
STAD	Telomere maintenance →	+0.034	+0.269	<.001	<.001	3	19
STAD	Positive regulation of double-strand break repair →	+0.028	+0.208	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,135 associations by consensus.

Methylation by HM13-AS1 expression — STAD

Explore this box plot interactively →