HLTF

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HLTF RNA expression is significantly associated with the go_rna of many other GO terms, with 3,787 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible HLTF-associated GO terms across cancer lineages are Replication fork reversal, Chromosomal DNA methylation maintenance following DNA replication, and Protein localization to chromosome. Each is linked with HLTF in more than 16 cancer types. Because this analysis shows association rather than direction, both HLTF-to-partner and partner-to-HLTF results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Replication fork reversal grouped by HLTF-low versus HLTF-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (HLTF→partner) and Y-score (partner→HLTF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSReplication fork reversal →+0.139+1.191<.001<.001316
OESOPHAGUSChromosomal DNA methylation maintenance following DNA replication →+0.269+1.206<.001<.001217
UPPER_AERODIGESTIVE_TRACTProtein localization to chromosome →+0.122+1.611<.001<.001315
LUNG_NSCLC_LUSCMitotic spindle organization →+0.086+1.431.007.004215
BLOOD_LeukemiaSpindle assembly →+0.070+1.360<.001<.001314
PANCREASSpindle organization →+0.068+1.320.001<.001313
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,787 associations by consensus.

Replication fork reversal by HLTF expression — OESOPHAGUS

Box plot of Replication fork reversal in HLTF-low vs HLTF-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration