HLA-DRB5

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HLA-DRB5 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,786 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HLA-DRB5-associated proteins across cancer lineages are HLA-DRA, HLA-DMA, and HLA-DQB1. Each is linked with HLA-DRB5 in more than 8 cancer types. Because this analysis shows association rather than direction, both HLA-DRB5-to-partner and partner-to-HLA-DRB5 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HLA-DRB5→partner) and Y-score (partner→HLA-DRB5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMHLA-DRA →+0.696+1.291<.001<.00139
GBMHLA-DMA →+0.823+1.698<.001<.00138
LSCCHLA-DQB1 →+1.300+1.822<.001<.00138
COADHLA-DRB1 →+0.678+1.642<.001<.00138
HNSCPARVG →+0.470+1.918<.001<.00137
LSCCARHGAP45_S569 →+0.659+1.179<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,786 associations by consensus.

Exploration