HLA-DQB1

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HLA-DQB1 mutation is significantly associated with the immune_cell of many other genes, with 1 significant associations in total. COAD shows the largest number of these associations.

The most reproducible HLA-DQB1-associated genes across cancer lineages are Fibroblasts. Each is linked with HLA-DQB1 in more than 1 cancer types. Because this analysis shows association rather than direction, both HLA-DQB1-to-partner and partner-to-HLA-DQB1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Fibroblasts grouped by HLA-DQB1-low versus HLA-DQB1-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HLA-DQB1→partner) and Y-score (partner→HLA-DQB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADFibroblasts →+0.025+5.721.044.03631
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

Fibroblasts by HLA-DQB1 expression — COAD

Box plot of Fibroblasts in HLA-DQB1-low vs HLA-DQB1-high samples in COAD.

Explore this box plot interactively →

Exploration