HLA-DOB

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HLA-DOB RNA expression is significantly associated with the protein abundance of many other proteins, with 17,133 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HLA-DOB-associated proteins across cancer lineages are CD48, CORO1A, and GBP4. Each is linked with HLA-DOB in more than 8 cancer types. Because this analysis shows association rather than direction, both HLA-DOB-to-partner and partner-to-HLA-DOB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HLA-DOB versus CD48 in OV, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HLA-DOB→partner) and Y-score (partner→HLA-DOB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCD48 →+0.888+1.041.006<.00139
LSCCCORO1A →+0.590+0.812<.001<.00139
HNSCGBP4 →+0.723+0.883<.001<.00139
LSCCIL16 →+0.686+0.868<.001<.00139
LSCCLCP1 →+0.605+0.867<.001<.00139
OVPSMB10 →+0.620+1.475<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,133 associations by consensus.

HLA-DOB vs CD48 — OV

Per-sample scatter of HLA-DOB vs CD48 in OV (Pearson r = 0.47).

Explore this scatter interactively →

Exploration