HAUS4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HAUS4 mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible HAUS4-associated genes across cancer lineages are SPHKAP, CNBD1, and OR2B3. Each is linked with HAUS4 in more than 1 cancer types. Because this analysis shows association rather than direction, both HAUS4-to-partner and partner-to-HAUS4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SPHKAP grouped by HAUS4-low versus HAUS4-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HAUS4→partner) and Y-score (partner→HAUS4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINESPHKAP →+0.006+5.415.007.00431
LARGE_INTESTINECNBD1 →+0.576+4.977<.001.00731
LARGE_INTESTINEOR2B3 →+0.022+5.415<.001.00431
LARGE_INTESTINEPOTEB2 →+0.012+5.415<.001.00431
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

SPHKAP by HAUS4 expression — LARGE_INTESTINE

Box plot of SPHKAP in HAUS4-low vs HAUS4-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration