H4C13

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, H4C13 mutation is significantly associated with the RNA expression of many other genes, with 18 significant associations in total. BLCA shows the largest number of these associations.

The most reproducible H4C13-associated genes across cancer lineages are RNU6-173P, HERC2P11, and NOS2P1. Each is linked with H4C13 in more than 1 cancer types. Because this analysis shows association rather than direction, both H4C13-to-partner and partner-to-H4C13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-173P grouped by H4C13-low versus H4C13-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (H4C13→partner) and Y-score (partner→H4C13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU6-173P →+0.595+4.937<.001.00532
BLCAHERC2P11 →+0.106+4.973<.001.00931
BLCANOS2P1 →+0.024+5.177<.001.00731
BRCARNU6-922P →+0.364+5.646<.001.00431
BRCAMIR3937 →+0.208+7.471<.001.00831
BRCAOR5AL1 →+0.092+7.471<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

RNU6-173P by H4C13 expression — UCEC

Box plot of RNU6-173P in H4C13-low vs H4C13-high samples in UCEC.

Explore this box plot interactively →

Exploration