H1-3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, H1-3 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,121 significant associations in total. GBM shows the largest number of these associations.

The most reproducible H1-3-associated proteins across cancer lineages are PRKAR2A, CDK1, and CHTF18_S871. Each is linked with H1-3 in more than 5 cancer types. Because this analysis shows association rather than direction, both H1-3-to-partner and partner-to-H1-3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, H1-3 versus PRKAR2A in HNSC, with a Pearson correlation of -0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (H1-3→partner) and Y-score (partner→H1-3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCPRKAR2A →-0.262-1.281<.001<.00136
GBMCDK1 →+0.677+1.150<.001<.00136
LSCCCHTF18_S871 →+0.828+0.800<.001.00136
LUADHNRNPK_S216 →+1.339+1.172<.001<.00136
UCECMAD2L1 →+0.567+1.716<.001<.00136
LUADMCM2_S27 →+0.667+0.877<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,121 associations by consensus.

H1-3 vs PRKAR2A — HNSC

Per-sample scatter of H1-3 vs PRKAR2A in HNSC (Pearson r = -0.26).

Explore this scatter interactively →

Exploration