GRP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GRP protein abundance is significantly associated with the RNA expression of many other genes, with 5,784 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GRP-associated genes across cancer lineages are DUSP26, GUCY1A2, and CSDC2. Each is linked with GRP in more than 2 cancer types. Because this analysis shows association rather than direction, both GRP-to-partner and partner-to-GRP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GRP versus DUSP26 in PDAC, with a Pearson correlation of 0.28.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GRP→partner) and Y-score (partner→GRP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACDUSP26 →+0.689+0.542<.001.00833
LSCCGUCY1A2 →+0.816+0.802<.001<.00133
LUADCSDC2 →+0.633+0.852<.001<.00133
BRCATMEM204 →+0.871+1.118.005.00333
BRCATAGLN →+1.254+0.848<.001.00333
BRCAIGFBP7 →+0.954+1.021.008<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,784 associations by consensus.

GRP vs DUSP26 — PDAC

Per-sample scatter of GRP vs DUSP26 in PDAC (Pearson r = 0.28).

Explore this scatter interactively →

Exploration