GRIN2B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GRIN2B mutation is significantly associated with the RNA expression of many other genes, with 5,158 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GRIN2B-associated genes across cancer lineages are ZNF367, PSMC3IP, and TMEM269. Each is linked with GRIN2B in more than 4 cancer types. Because this analysis shows association rather than direction, both GRIN2B-to-partner and partner-to-GRIN2B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ZNF367 grouped by GRIN2B-low versus GRIN2B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GRIN2B→partner) and Y-score (partner→GRIN2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECZNF367 →+0.548+1.584<.001<.00135
UCECPSMC3IP →+0.468+1.461<.001<.00135
UCECTMEM269 →+0.116+1.110<.001.00435
SKCMPPIP5K1 →+0.225+0.799.005.00734
UCECMTA2 →+0.287+1.820<.001<.00134
COADSKA1 →+0.674+2.335<.001.00334
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,158 associations by consensus.

ZNF367 by GRIN2B expression — UCEC

Box plot of ZNF367 in GRIN2B-low vs GRIN2B-high samples in UCEC.

Explore this box plot interactively →

Exploration