GPC5-IT1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GPC5-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,627 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GPC5-IT1-associated proteins across cancer lineages are ASRGL1, DDAH1, and AK1. Each is linked with GPC5-IT1 in more than 2 cancer types. Because this analysis shows association rather than direction, both GPC5-IT1-to-partner and partner-to-GPC5-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GPC5-IT1 versus ASRGL1 in GBM, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GPC5-IT1→partner) and Y-score (partner→GPC5-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMASRGL1 →+0.469+1.000<.001<.00133
LSCCDDAH1 →+0.469+0.272<.001<.00133
LUADAK1 →+0.481+0.692<.001<.00133
LSCCAQP4 →+0.560+0.233<.001<.00133
LUADAQP4_S285 →+1.171+0.725<.001.00133
LSCCAQP4_Y277 →+1.023+0.294<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,627 associations by consensus.

GPC5-IT1 vs ASRGL1 — GBM

Per-sample scatter of GPC5-IT1 vs ASRGL1 in GBM (Pearson r = 0.35).

Explore this scatter interactively →

Exploration