GPATCH2L

Across TCGA cell cohorts, GPATCH2L RNA expression is significantly associated with the RNA expression of many other genes, with 11,854 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible GPATCH2L-associated genes across cancer lineages are YLPM1, AREL1, and RBM25. Each is linked with GPATCH2L in more than 19 cancer types. Because this analysis shows association rather than direction, both GPATCH2L-to-partner and partner-to-GPATCH2L results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GPATCH2L versus YLPM1 in UPPER_AERODIGESTIVE_TRACT, with a Pearson correlation of 0.85.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPATCH2L→partner) and Y-score (partner→GPATCH2L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	YLPM1 →	+0.939	+1.181	<.001	<.001	3	20
UPPER_AERODIGESTIVE_TRACT	AREL1 →	+1.114	+1.237	<.001	<.001	3	20
OESOPHAGUS	RBM25 →	+1.231	+1.517	<.001	<.001	3	19
BONE	DYNC1H1 →	+1.335	+0.776	<.001	<.001	3	19
LUNG_NSCLC_LUSC	KLC1 →	+1.301	+1.137	<.001	.001	3	19
KIDNEY	ZFYVE26 →	+1.178	+1.331	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,854 associations by consensus.

GPATCH2L vs YLPM1 — UPPER_AERODIGESTIVE_TRACT

Explore this scatter interactively →