GORAB

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GORAB mutation is significantly associated with the RNA expression of many other genes, with 727 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GORAB-associated genes across cancer lineages are RNA5SP413, RNA5SP423, and MDH1P2. Each is linked with GORAB in more than 1 cancer types. Because this analysis shows association rather than direction, both GORAB-to-partner and partner-to-GORAB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP413 grouped by GORAB-low versus GORAB-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GORAB→partner) and Y-score (partner→GORAB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP413 →+1.103+1.862<.001.00432
UCECRNA5SP423 →+0.728+2.302<.001<.00132
COADMDH1P2 →+0.117+3.622<.001.00232
UCECIDI2-AS1 →+0.237+2.184<.001.00232
UCECRNA5SP408 →+0.228+2.508.007.00332
UCECRNU6-158P →+0.304+2.167<.001.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 727 associations by consensus.

RNA5SP413 by GORAB expression — UCEC

Box plot of RNA5SP413 in GORAB-low vs GORAB-high samples in UCEC.

Explore this box plot interactively →

Exploration