GNPNAT1

Across TCGA patient cohorts, GNPNAT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,720 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GNPNAT1-associated proteins across cancer lineages are RMDN2, SUPT16H, and MTHFD1. Each is linked with GNPNAT1 in more than 6 cancer types. Because this analysis shows association rather than direction, both GNPNAT1-to-partner and partner-to-GNPNAT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNPNAT1 versus RMDN2 in LUAD, with a Pearson correlation of -0.26.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GNPNAT1→partner) and Y-score (partner→GNPNAT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	RMDN2 →	-0.481	-0.581	.003	.001	3	7
GBM	SUPT16H →	+0.396	+0.412	<.001	<.001	3	7
UCEC	MTHFD1 →	+0.328	+0.636	<.001	<.001	3	7
OV	AHSA1 →	+0.396	+0.744	<.001	<.001	3	7
OV	TMX1 →	+0.366	+0.638	.002	.002	3	6
LSCC	VRK1 →	+0.508	+0.636	.003	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,720 associations by consensus.

GNPNAT1 vs RMDN2 — LUAD

Explore this scatter interactively →