GNPDA1

Across TCGA patient cohorts, GNPDA1 protein abundance is significantly associated with the protein abundance of many other proteins, with 17,055 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible GNPDA1-associated proteins across cancer lineages are SNX2, GNPDA2, and AIF1. Each is linked with GNPDA1 in more than 8 cancer types. Because this analysis shows association rather than direction, both GNPDA1-to-partner and partner-to-GNPDA1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNPDA1 versus SNX2 in LSCC, with a Pearson correlation of 0.42.

protein abundance associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GNPDA1→partner) and Y-score (partner→GNPDA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SNX2 →	+0.266	+0.302	<.001	<.001	3	8
COAD	GNPDA2 →	+0.478	+0.497	<.001	<.001	3	7
COAD	AIF1 →	+0.567	+0.451	<.001	<.001	3	7
COAD	AMDHD2 →	+0.327	+0.394	.008	.009	1	9
OV	ABHD14B →	+0.667	+0.364	<.001	<.001	3	7
BRCA	STAT5A →	+0.412	+0.308	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,055 associations by consensus.

GNPDA1 vs SNX2 — LSCC

Explore this scatter interactively →