GM2AP2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GM2AP2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,438 significant associations in total. STAD shows the largest number of these associations.

The most reproducible GM2AP2-associated GO terms across cancer lineages are Ubiquinone metabolic process, NADH dehydrogenase complex assembly, and Oxidative phosphorylation. Each is linked with GM2AP2 in more than 10 cancer types. Because this analysis shows association rather than direction, both GM2AP2-to-partner and partner-to-GM2AP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ubiquinone metabolic process grouped by GM2AP2-low versus GM2AP2-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GM2AP2→partner) and Y-score (partner→GM2AP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADUbiquinone metabolic process →+0.069+0.174<.001<.001311
STADNADH dehydrogenase complex assembly →+0.080+0.171<.001<.001311
STADOxidative phosphorylation →+0.092+0.179<.001<.001310
STADProton motive force-driven ATP synthesis →+0.096+0.153<.001<.001310
STADMitochondrial translation →+0.089+0.173<.001<.001310
STADMitochondrial gene expression →+0.089+0.200<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,438 associations by consensus.

Ubiquinone metabolic process by GM2AP2 expression — STAD

Box plot of Ubiquinone metabolic process in GM2AP2-low vs GM2AP2-high samples in STAD.

Explore this box plot interactively →

Exploration