GK-AS1

Across TCGA patient cohorts, GK-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,564 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible GK-AS1-associated proteins across cancer lineages are MMP9, NCF1, and NCF2. Each is linked with GK-AS1 in more than 7 cancer types. Because this analysis shows association rather than direction, both GK-AS1-to-partner and partner-to-GK-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GK-AS1 versus MMP9 in LSCC, with a Pearson correlation of 0.46.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GK-AS1→partner) and Y-score (partner→GK-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	MMP9 →	+1.292	+0.589	<.001	<.001	3	8
COAD	NCF1 →	+0.738	+0.957	<.001	<.001	3	8
GBM	NCF2 →	+0.709	+0.636	<.001	<.001	3	8
GBM	AZU1 →	+0.901	+0.590	.001	<.001	3	8
GBM	HK3 →	+0.954	+0.697	<.001	<.001	3	8
GBM	ITGAM →	+0.735	+0.691	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,564 associations by consensus.

GK-AS1 vs MMP9 — LSCC

Explore this scatter interactively →