GHITM

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GHITM protein abundance is significantly associated with the RNA expression of many other genes, with 9,942 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible GHITM-associated genes across cancer lineages are ZNF699, ZNF430, and GLIS2. Each is linked with GHITM in more than 4 cancer types. Because this analysis shows association rather than direction, both GHITM-to-partner and partner-to-GHITM results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GHITM versus ZNF699 in OV, with a Pearson correlation of -0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GHITM→partner) and Y-score (partner→GHITM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVZNF699 →-0.501-0.532.003.00135
OVZNF430 →-0.527-0.507<.001.00234
OVGLIS2 →-0.789-0.378.004.00334
GBMRBMS1 →-0.581-0.404<.001.00134
LUADSTARD9 →-0.588-0.723.001.00434
LSCCVDAC2 →+0.749+0.362<.001.00534
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,942 associations by consensus.

GHITM vs ZNF699 — OV

Per-sample scatter of GHITM vs ZNF699 in OV (Pearson r = -0.35).

Explore this scatter interactively →

Exploration