GGTLC1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GGTLC1 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,254 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GGTLC1-associated proteins across cancer lineages are TRA2A_S20, PLEKHA6_S808, and ELOA_S163. Each is linked with GGTLC1 in more than 3 cancer types. Because this analysis shows association rather than direction, both GGTLC1-to-partner and partner-to-GGTLC1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GGTLC1 versus TRA2A_S20 in LSCC, with a Pearson correlation of -0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GGTLC1→partner) and Y-score (partner→GGTLC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTRA2A_S20 →-1.189-1.060<.001<.00134
LSCCPLEKHA6_S808 →+0.686+0.908<.001<.00134
LUADELOA_S163 →+0.785+1.368<.001<.00133
LSCCNCAPD2 →-0.497-0.826<.001<.00133
CCRCCNOLC1_S563 →-0.473-0.088.009.00533
LUADTPI1_S80 →-0.458-1.236<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,254 associations by consensus.

GGTLC1 vs TRA2A_S20 — LSCC

Per-sample scatter of GGTLC1 vs TRA2A_S20 in LSCC (Pearson r = -0.42).

Explore this scatter interactively →

Exploration