GCNT1P3

Across TCGA patient cohorts, GCNT1P3 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,151 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GCNT1P3-associated proteins across cancer lineages are IL1RAP, IL1RAP_S555, and IL1RAP_S557. Each is linked with GCNT1P3 in more than 6 cancer types. Because this analysis shows association rather than direction, both GCNT1P3-to-partner and partner-to-GCNT1P3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GCNT1P3 versus IL1RAP in GBM, with a Pearson correlation of 0.89.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GCNT1P3→partner) and Y-score (partner→GCNT1P3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	IL1RAP →	+1.081	+1.619	<.001	<.001	3	7
GBM	IL1RAP_S555 →	+1.045	+1.467	<.001	<.001	3	7
LSCC	IL1RAP_S557 →	+1.296	+1.197	<.001	<.001	3	7
CCRCC	ELANE →	+0.838	+0.704	<.001	.001	3	5
PDAC	ALDH9A1 →	-0.285	-0.559	<.001	<.001	3	5
LUAD	ITGAV →	+0.354	+0.500	<.001	.005	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,151 associations by consensus.

GCNT1P3 vs IL1RAP — GBM

Explore this scatter interactively →