GBA3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GBA3 protein abundance is significantly associated with the RNA expression of many other genes, with 4,572 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible GBA3-associated genes across cancer lineages are GRK3, AP3B2, and CD4. Each is linked with GBA3 in more than 1 cancer types. Because this analysis shows association rather than direction, both GBA3-to-partner and partner-to-GBA3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GBA3 versus GRK3 in PDAC, with a Pearson correlation of -0.51.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GBA3→partner) and Y-score (partner→GBA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACGRK3 →-0.588-0.641<.001.00632
PDACAP3B2 →-0.583-0.779<.001.00232
PDACCD4 →-0.550-0.666.004.00132
CCRCCPF4V1 →+1.104+0.730.003.00632
PDACMAN1C1 →-0.857-0.777<.001<.00132
PDACUNC13A →-0.705-0.647.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,572 associations by consensus.

GBA3 vs GRK3 — PDAC

Per-sample scatter of GBA3 vs GRK3 in PDAC (Pearson r = -0.51).

Explore this scatter interactively →

Exploration