GAMTP2

Across TCGA patient cohorts, GAMTP2 RNA expression is significantly associated with the protein abundance of many other proteins, with 4,109 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible GAMTP2-associated proteins across cancer lineages are NUP153_S687, TOP2A_S1247, and VRK1. Each is linked with GAMTP2 in more than 2 cancer types. Because this analysis shows association rather than direction, both GAMTP2-to-partner and partner-to-GAMTP2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GAMTP2 versus NUP153_S687 in BRCA, with a Pearson correlation of -0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GAMTP2→partner) and Y-score (partner→GAMTP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	NUP153_S687 →	-0.682	-0.353	<.001	<.001	3	3
UCEC	TOP2A_S1247 →	-0.671	-0.375	.002	<.001	3	3
UCEC	VRK1 →	-0.274	-0.355	.002	.002	3	3
BRCA	DDX39A →	-0.356	-0.360	.001	<.001	3	3
BRCA	EZH2_T367 →	-0.463	-0.260	.004	.006	3	3
BRCA	KPNA2 →	-0.514	-0.293	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,109 associations by consensus.

GAMTP2 vs NUP153_S687 — BRCA

Explore this scatter interactively →