GALP

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GALP mutation is significantly associated with the RNA expression of many other genes, with 695 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GALP-associated genes across cancer lineages are CHAF1A, RHBDD3, and PHF5A. Each is linked with GALP in more than 1 cancer types. Because this analysis shows association rather than direction, both GALP-to-partner and partner-to-GALP results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALP→partner) and Y-score (partner→GALP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCHAF1A →+0.727+3.365<.001.00432
UCECRHBDD3 →+0.473+3.491.008.00232
UCECPHF5A →+0.514+2.700.003.00632
UCECASF1B →+0.790+3.818.002<.00132
UCECUBE2S →+0.833+3.839.002<.00132
UCECTWIST1 →+1.416+3.467.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 695 associations by consensus.

Exploration