GALM

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GALM RNA expression is significantly associated with the protein abundance of many other proteins, with 17,270 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GALM-associated proteins across cancer lineages are EML4, SAMHD1, and HCLS1. Each is linked with GALM in more than 7 cancer types. Because this analysis shows association rather than direction, both GALM-to-partner and partner-to-GALM results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GALM versus EML4 in OV, with a Pearson correlation of 0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GALM→partner) and Y-score (partner→GALM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVEML4 →+0.380+0.760<.001<.00138
HNSCSAMHD1 →+0.571+0.721<.001.00137
GBMHCLS1 →+0.536+0.428<.001<.00136
UCECIKZF1_S63 →+0.864+1.346.002.00536
GBMCASP10 →+0.464+0.554<.001<.00136
GBMRBM47 →+0.500+0.459<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,270 associations by consensus.

GALM vs EML4 — OV

Per-sample scatter of GALM vs EML4 in OV (Pearson r = 0.45).

Explore this scatter interactively →

Exploration