GAL3ST4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GAL3ST4 mutation is significantly associated with the RNA expression of many other genes, with 707 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GAL3ST4-associated genes across cancer lineages are ASB16-AS1, RN7SL332P, and CCDC34P1. Each is linked with GAL3ST4 in more than 2 cancer types. Because this analysis shows association rather than direction, both GAL3ST4-to-partner and partner-to-GAL3ST4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GAL3ST4→partner) and Y-score (partner→GAL3ST4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECASB16-AS1 →+0.490+2.436<.001.00233
LUSCRN7SL332P →+0.395+6.467<.001<.00133
LUSCCCDC34P1 →+0.145+5.191<.001.00333
LUSCRNU6-1101P →+0.473+5.906<.001.00133
UCECMIR7702 →+0.191+3.973<.001.00632
LUADMIR1224 →+0.156+4.748<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 707 associations by consensus.

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