GADD45B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GADD45B mutation is significantly associated with the RNA expression of many other genes, with 53 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GADD45B-associated genes across cancer lineages are KRTAP21-1, RNA5SP136, and MTCO1P35. Each is linked with GADD45B in more than 1 cancer types. Because this analysis shows association rather than direction, both GADD45B-to-partner and partner-to-GADD45B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KRTAP21-1 grouped by GADD45B-low versus GADD45B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GADD45B→partner) and Y-score (partner→GADD45B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKRTAP21-1 →+0.215+5.242<.001.00732
UCECRNA5SP136 →+0.692+5.299<.001.00632
UCECMTCO1P35 →+0.532+5.621.001.00432
SKCMLINC02424 →+0.142+5.097<.001.00832
SKCMOR1L1 →+0.043+5.594<.001.00431
SKCMHNRNPCL4 →+0.180+5.097<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 53 associations by consensus.

KRTAP21-1 by GADD45B expression — UCEC

Box plot of KRTAP21-1 in GADD45B-low vs GADD45B-high samples in UCEC.

Explore this box plot interactively →

Exploration