GABRA6

Across TCGA patient cohorts, GABRA6 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,966 significant associations in total. STAD shows the largest number of these associations.

The most reproducible GABRA6-associated GO terms across cancer lineages are Microtubule-based transport, Regulation of mRNA processing, and Protein stabilization. Each is linked with GABRA6 in more than 11 cancer types. Because this analysis shows association rather than direction, both GABRA6-to-partner and partner-to-GABRA6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Microtubule-based transport grouped by GABRA6-low versus GABRA6-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GABRA6→partner) and Y-score (partner→GABRA6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Microtubule-based transport →	+0.042	+0.068	<.001	<.001	3	11
ESCA	Regulation of mRNA processing →	+0.063	+0.060	<.001	.008	3	11
ESCA	Protein stabilization →	+0.100	+0.153	<.001	.001	3	11
STAD	Regulation of cell division →	+0.051	+0.067	<.001	<.001	3	11
STAD	Response to misfolded protein →	+0.051	+0.071	<.001	<.001	3	11
ESCA	Organelle disassembly →	+0.092	+0.126	<.001	.005	2	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,966 associations by consensus.

Microtubule-based transport by GABRA6 expression — STAD

Explore this box plot interactively →