FARP2

Across TCGA patient cohorts, FARP2 mutation is significantly associated with the RNA expression of many other genes, with 3,412 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FARP2-associated genes across cancer lineages are LINC01072, MIR4682, and RNU2-27P. Each is linked with FARP2 in more than 2 cancer types. Because this analysis shows association rather than direction, both FARP2-to-partner and partner-to-FARP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC01072 grouped by FARP2-low versus FARP2-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FARP2→partner) and Y-score (partner→FARP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	LINC01072 →	+0.062	+3.294	.002	.006	3	3
CESC	MIR4682 →	+0.329	+3.996	.002	.005	3	3
UCEC	RNU2-27P →	+0.662	+1.784	<.001	<.001	3	3
HNSC	RNU6-728P →	+0.188	+5.351	<.001	.002	3	3
UCEC	CHAF1A →	+0.547	+2.021	<.001	<.001	3	3
LIHC	RNU1-6P →	+0.546	+5.584	<.001	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,412 associations by consensus.

LINC01072 by FARP2 expression — COAD

Explore this box plot interactively →