FAR1-IT1

Across TCGA patient cohorts, FAR1-IT1 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,721 significant associations in total. STAD shows the largest number of these associations.

The most reproducible FAR1-IT1-associated GO terms across cancer lineages are Regulation of RNA splicing, Protein-containing complex disassembly, and ERBB signaling pathway. Each is linked with FAR1-IT1 in more than 23 cancer types. Because this analysis shows association rather than direction, both FAR1-IT1-to-partner and partner-to-FAR1-IT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of RNA splicing grouped by FAR1-IT1-low versus FAR1-IT1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAR1-IT1→partner) and Y-score (partner→FAR1-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of RNA splicing →	+0.067	+0.464	<.001	<.001	3	24
STAD	Protein-containing complex disassembly →	+0.050	+0.393	<.001	<.001	3	23
STAD	ERBB signaling pathway →	+0.048	+0.369	<.001	<.001	3	23
STAD	Obsolete histone modification →	+0.054	+0.449	<.001	<.001	3	22
STAD	Epigenetic regulation of gene expression →	+0.056	+0.389	<.001	<.001	3	22
STAD	Regulation of post-translational protein modification →	+0.053	+0.420	<.001	<.001	3	21

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,721 associations by consensus.

Regulation of RNA splicing by FAR1-IT1 expression — STAD

Explore this box plot interactively →