FAM98C

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM98C mutation is significantly associated with the RNA expression of many other genes, with 370 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM98C-associated genes across cancer lineages are DNAJA1P2, CDY5P, and MIR3137. Each is linked with FAM98C in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM98C-to-partner and partner-to-FAM98C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNAJA1P2 grouped by FAM98C-low versus FAM98C-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM98C→partner) and Y-score (partner→FAM98C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCADNAJA1P2 →+0.040+4.363.006.00732
BRCACDY5P →+0.029+8.055<.001.00732
HNSCMIR3137 →+0.667+5.069<.001.00832
BLCALINC00572 →+0.054+4.588<.001.00831
BLCARN7SL173P →+0.199+4.396<.001.00631
BRCAMIR551B →+0.276+7.731<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 370 associations by consensus.

DNAJA1P2 by FAM98C expression — BLCA

Box plot of DNAJA1P2 in FAM98C-low vs FAM98C-high samples in BLCA.

Explore this box plot interactively →

Exploration