FAM89B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM89B mutation is significantly associated with the RNA expression of many other genes, with 41 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM89B-associated genes across cancer lineages are RN7SL495P, ABHD17AP9, and RN7SL557P. Each is linked with FAM89B in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM89B-to-partner and partner-to-FAM89B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL495P grouped by FAM89B-low versus FAM89B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM89B→partner) and Y-score (partner→FAM89B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SL495P →+0.228+4.750<.001.00532
BLCAABHD17AP9 →+0.074+7.640<.001.00931
BLCARN7SL557P →+0.139+7.640<.001.00931
COADMIR498 →+0.306+7.741<.001.00931
COADNDUFA5P7 →+0.174+7.741<.001.00931
UCECRNA5SP414 →+1.098+3.840<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 41 associations by consensus.

RN7SL495P by FAM89B expression — UCEC

Box plot of RN7SL495P in FAM89B-low vs FAM89B-high samples in UCEC.

Explore this box plot interactively →

Exploration