FAM87A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM87A mutation is significantly associated with the RNA expression of many other genes, with 37 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM87A-associated genes across cancer lineages are RN7SL248P, MIR6780B, and MIR8053. Each is linked with FAM87A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM87A-to-partner and partner-to-FAM87A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL248P grouped by FAM87A-low versus FAM87A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM87A→partner) and Y-score (partner→FAM87A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SL248P →+0.139+4.722<.001.00431
UCECMIR6780B →+0.469+3.889<.001.00431
UCECMIR8053 →+0.527+4.582<.001.00531
UCECRFPL4AP6 →+0.203+3.354.001.00731
UCECSNORD116-10 →+0.335+4.335<.001.00731
UCECRNU6-674P →+0.919+4.286<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 37 associations by consensus.

RN7SL248P by FAM87A expression — UCEC

Box plot of RN7SL248P in FAM87A-low vs FAM87A-high samples in UCEC.

Explore this box plot interactively →

Exploration