Across TCGA patient cohorts, FAM239B RNA expression is significantly associated with the go_rna of many other GO terms, with 4,220 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible FAM239B-associated GO terms across cancer lineages are Post-Golgi vesicle-mediated transport, Regulation of vacuole organization, and Golgi vesicle transport. Each is linked with FAM239B in more than 12 cancer types. Because this analysis shows association rather than direction, both FAM239B-to-partner and partner-to-FAM239B results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM239B→partner) and Y-score (partner→FAM239B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THYM	Post-Golgi vesicle-mediated transport →	+0.041	+0.434	.008	.005	1	13
UCS	Regulation of vacuole organization →	+0.036	+0.763	.004	.003	2	11
KIRP	Golgi vesicle transport →	+0.020	+0.434	<.001	<.001	2	11
CESC	Protein demethylation →	+0.041	+0.477	<.001	<.001	2	11
UCEC	Negative regulation of autophagy →	+0.018	+0.323	<.001	<.001	3	9
UCEC	Regulation of macroautophagy →	+0.016	+0.371	.001	<.001	1	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,220 associations by consensus.

Exploration

FAM239B survival (RNA) · tumor vs normal (RNA) · all FAM239B data types