FAM171B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM171B protein abundance is significantly associated with the RNA expression of many other genes, with 3,357 significant associations in total. GBM shows the largest number of these associations.

The most reproducible FAM171B-associated genes across cancer lineages are GRK3, LGALS1, and PIK3IP1. Each is linked with FAM171B in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM171B-to-partner and partner-to-FAM171B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM171B versus GRK3 in GBM, with a Pearson correlation of 0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM171B→partner) and Y-score (partner→FAM171B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMGRK3 →+0.493+0.440<.001<.00131
GBMLGALS1 →-0.518-0.298.002.00131
GBMPIK3IP1 →+0.528+0.319.004.00731
GBMSOX10 →+1.745+0.468<.001<.00131
GBMSEPTIN3 →+0.830+0.441<.001<.00131
GBMTPTEP1 →+0.980+0.305.009.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,357 associations by consensus.

FAM171B vs GRK3 — GBM

Per-sample scatter of FAM171B vs GRK3 in GBM (Pearson r = 0.41).

Explore this scatter interactively →

Exploration