FAM171B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM171B mutation is significantly associated with the RNA expression of many other genes, with 1,054 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible FAM171B-associated genes across cancer lineages are PRAMEF14, NOB1, and STOX1. Each is linked with FAM171B in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM171B-to-partner and partner-to-FAM171B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRAMEF14 grouped by FAM171B-low versus FAM171B-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM171B→partner) and Y-score (partner→FAM171B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCPRAMEF14 →+0.139+2.938.001.00332
LARGE_INTESTINENOB1 →+0.532+2.829.002<.00132
LARGE_INTESTINESTOX1 →+0.818+3.082.005.00732
LARGE_INTESTINETMEM107 →+0.793+3.237.003.00332
LARGE_INTESTINEZNF48 →+0.513+2.043.002.00832
LARGE_INTESTINEDNAH10 →+0.594+2.043<.001.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,054 associations by consensus.

PRAMEF14 by FAM171B expression — LUNG_SCLC

Box plot of PRAMEF14 in FAM171B-low vs FAM171B-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration