FAM13B

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM13B mutation is significantly associated with the total protein of many other genes, with 34 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM13B-associated genes across cancer lineages are Di-Ras3, A-Raf_pS299, and ERK2. Each is linked with FAM13B in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM13B-to-partner and partner-to-FAM13B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Di-Ras3 grouped by FAM13B-low versus FAM13B-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM13B→partner) and Y-score (partner→FAM13B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCADi-Ras3 →+0.218+2.841.005.03532
UCECA-Raf_pS299 →-0.164-1.906<.001.01532
UCECERK2 →+0.139+1.906.031.01432
UCECMEK1 →+0.314+2.000.010.00932
UCECNotch1 →+0.126+1.594.007.02132
UCECAkt_pT308 →+0.467+1.807.026.02432
Each partner links to its Q-omics profile. Showing the 6 strongest of 34 associations by consensus.

Di-Ras3 by FAM13B expression — BLCA

Box plot of Di-Ras3 in FAM13B-low vs FAM13B-high samples in BLCA.

Explore this box plot interactively →

Exploration