FAM120C

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM120C mutation is significantly associated with the RNA expression of many other genes, with 29 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible FAM120C-associated genes across cancer lineages are OR56A5, TECTB, and OR1L4. Each is linked with FAM120C in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM120C-to-partner and partner-to-FAM120C results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM120C→partner) and Y-score (partner→FAM120C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTOR56A5 →+0.045+4.736<.001.00932
OESOPHAGUSTECTB →+0.006+3.857<.001.00231
OESOPHAGUSOR1L4 →+0.023+3.392.006.00731
OESOPHAGUSSCYGR2 →+0.102+3.857<.001.00231
BLOOD_LymphomaKRTAP4-1 →+0.179+4.867<.001.00931
OVARYFGF6 →+0.066+5.807<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

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