FAM102A

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM102A mutation is significantly associated with the total protein of many other genes, with 24 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FAM102A-associated genes across cancer lineages are NF2, GAPDH, and ATM. Each is linked with FAM102A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM102A-to-partner and partner-to-FAM102A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NF2 grouped by FAM102A-low versus FAM102A-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM102A→partner) and Y-score (partner→FAM102A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADNF2 →+0.222+2.820.027.03532
UCECGAPDH →+0.827+3.169.004.01832
UCECATM →-1.006-3.169<.001.02032
COADINPP4B →-0.384-2.991.047.03631
UCECEGFR_pY1068 →-0.325-3.169.018.02031
UCECNotch1 →+0.203+2.820.008.03531
Each partner links to its Q-omics profile. Showing the 6 strongest of 24 associations by consensus.

NF2 by FAM102A expression — COAD

Box plot of NF2 in FAM102A-low vs FAM102A-high samples in COAD.

Explore this box plot interactively →

Exploration