FAM102A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FAM102A mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible FAM102A-associated genes across cancer lineages are ODF1, ZIC3, and CTRB2. Each is linked with FAM102A in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM102A-to-partner and partner-to-FAM102A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ODF1 grouped by FAM102A-low versus FAM102A-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM102A→partner) and Y-score (partner→FAM102A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaODF1 →+0.061+3.944.002.00631
BLOOD_LeukemiaZIC3 →+0.015+4.060<.001.00331
BLOOD_LeukemiaCTRB2 →+0.133+3.855<.001.00731
BLOOD_LeukemiaLCE1E →+0.556+4.037<.001.00431
BLOOD_LeukemiaSLC5A8 →+0.111+4.786<.001<.00131
LARGE_INTESTINEOR10W1 →+0.022+4.977<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

ODF1 by FAM102A expression — BLOOD_Leukemia

Box plot of ODF1 in FAM102A-low vs FAM102A-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration