ERVFRD-3

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ERVFRD-3 RNA expression is significantly associated with the RNA expression of many other genes, with 17,233 significant associations in total. THYM shows the largest number of these associations.

The most reproducible ERVFRD-3-associated genes across cancer lineages are CICP14, PARGP1, and NKTR. Each is linked with ERVFRD-3 in more than 32 cancer types. Because this analysis shows association rather than direction, both ERVFRD-3-to-partner and partner-to-ERVFRD-3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ERVFRD-3 versus CICP14 in THYM, with a Pearson correlation of 0.72.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ERVFRD-3→partner) and Y-score (partner→ERVFRD-3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
THYMCICP14 →+1.763+0.122<.001<.001333
THYMPARGP1 →+1.180+0.125<.001<.001333
UVMNKTR →+1.491+0.138<.001<.001333
THYMARFGEF2 →+1.331+0.125<.001<.001333
THYMKIAA1109 →+1.490+0.117<.001<.001333
THYMSHPRH →+1.145+0.124<.001<.001333
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,233 associations by consensus.

ERVFRD-3 vs CICP14 — THYM

Per-sample scatter of ERVFRD-3 vs CICP14 in THYM (Pearson r = 0.72).

Explore this scatter interactively →

Exploration