ELL

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ELL mutation is significantly associated with the RNA expression of many other genes, with 1,193 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ELL-associated genes across cancer lineages are MTND6P16, TLE6, and YBEY. Each is linked with ELL in more than 2 cancer types. Because this analysis shows association rather than direction, both ELL-to-partner and partner-to-ELL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MTND6P16 grouped by ELL-low versus ELL-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ELL→partner) and Y-score (partner→ELL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMTND6P16 →+0.088+5.268<.001.00333
COADTLE6 →+0.502+3.351.008.00532
UCECYBEY →+0.385+1.895.007.00132
UCECSPNS2 →+0.807+2.016.001.00532
UCECSNAI3 →+0.394+2.158.001.00932
UCECEMID1 →-1.086-1.863.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,193 associations by consensus.

MTND6P16 by ELL expression — BRCA

Box plot of MTND6P16 in ELL-low vs ELL-high samples in BRCA.

Explore this box plot interactively →

Exploration