EFS

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EFS mutation is significantly associated with the total protein of many other genes, with 29 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible EFS-associated genes across cancer lineages are eEF2, Ku80, and ATM. Each is linked with EFS in more than 1 cancer types. Because this analysis shows association rather than direction, both EFS-to-partner and partner-to-EFS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by EFS-low versus EFS-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EFS→partner) and Y-score (partner→EFS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.507+2.459.003.02032
UCECKu80 →+0.305+2.472.007.01132
UCECATM →-0.626-2.986.004.03532
UCECEGFR_pY1068 →-0.365-3.169.002.01931
UCECACC1 →+0.440+3.013.012.01831
UCECAcetyl-a-Tubulin-Lys40 →+0.634+3.009.009.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

eEF2 by EFS expression — UCEC

Box plot of eEF2 in EFS-low vs EFS-high samples in UCEC.

Explore this box plot interactively →

Exploration