EFR3A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, EFR3A protein abundance is significantly associated with the RNA expression of many other genes, with 10,164 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible EFR3A-associated genes across cancer lineages are MNS1, MEX3A, and KLHL14. Each is linked with EFR3A in more than 4 cancer types. Because this analysis shows association rather than direction, both EFR3A-to-partner and partner-to-EFR3A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, EFR3A versus MNS1 in LSCC, with a Pearson correlation of -0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (EFR3A→partner) and Y-score (partner→EFR3A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMNS1 →-0.695-0.318<.001<.00135
LSCCMEX3A →-1.215-0.251<.001.00135
UCECKLHL14 →-0.703-0.233.006.00434
UCECSETDB1 →-0.432-0.275<.001<.00134
GBMRBBP4 →-0.425-0.270<.001<.00134
UCECZNF496 →-0.556-0.329<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,164 associations by consensus.

EFR3A vs MNS1 — LSCC

Per-sample scatter of EFR3A vs MNS1 in LSCC (Pearson r = -0.49).

Explore this scatter interactively →

Exploration