EDC4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, EDC4 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,915 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible EDC4-associated GO terms across cancer lineages are mRNA transport, Nuclear export, and Positive regulation of nuclear cell cycle DNA replication. Each is linked with EDC4 in more than 17 cancer types. Because this analysis shows association rather than direction, both EDC4-to-partner and partner-to-EDC4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, mRNA transport grouped by EDC4-low versus EDC4-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (EDC4→partner) and Y-score (partner→EDC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEmRNA transport →+0.117+1.079<.001<.001318
BLOOD_LymphomaNuclear export →+0.079+0.811<.001<.001318
BONEPositive regulation of nuclear cell cycle DNA replication →+0.159+1.066<.001<.001318
BONEmRNA alternative polyadenylation →+0.085+0.948<.001<.001318
BONETelomere organization →+0.114+1.333<.001<.001317
BONESubtelomeric heterochromatin formation →+0.125+0.932<.001<.001317
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,915 associations by consensus.

mRNA transport by EDC4 expression — BONE

Box plot of mRNA transport in EDC4-low vs EDC4-high samples in BONE.

Explore this box plot interactively →

Exploration