DTX2P1-UPK3BP1-PMS2P11

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DTX2P1-UPK3BP1-PMS2P11 mutation is significantly associated with the RNA expression of many other genes, with 26 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DTX2P1-UPK3BP1-PMS2P11-associated genes across cancer lineages are PDCL2P1, RNU6-747P, and MIR4796. Each is linked with DTX2P1-UPK3BP1-PMS2P11 in more than 1 cancer types. Because this analysis shows association rather than direction, both DTX2P1-UPK3BP1-PMS2P11-to-partner and partner-to-DTX2P1-UPK3BP1-PMS2P11 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PDCL2P1 grouped by DTX2P1-UPK3BP1-PMS2P11-low versus DTX2P1-UPK3BP1-PMS2P11-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DTX2P1-UPK3BP1-PMS2P11→partner) and Y-score (partner→DTX2P1-UPK3BP1-PMS2P11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPDCL2P1 →+0.183+3.484.001.00432
STADRNU6-747P →+0.678+5.463<.001.00531
UCECMIR4796 →+0.354+3.771<.001.00231
UCECLINC01899 →+0.175+2.812<.001.00831
UCECSNORA59B →+0.293+3.861<.001.00131
UCECURGCP-MRPS24 →+0.304+3.643<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

PDCL2P1 by DTX2P1-UPK3BP1-PMS2P11 expression — UCEC

Box plot of PDCL2P1 in DTX2P1-UPK3BP1-PMS2P11-low vs DTX2P1-UPK3BP1-PMS2P11-high samples in UCEC.

Explore this box plot interactively →

Exploration