DNAJC4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DNAJC4 mutation is significantly associated with the RNA expression of many other genes, with 45 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DNAJC4-associated genes across cancer lineages are MIR6747, RN7SL575P, and RNU6-1312P. Each is linked with DNAJC4 in more than 1 cancer types. Because this analysis shows association rather than direction, both DNAJC4-to-partner and partner-to-DNAJC4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR6747 grouped by DNAJC4-low versus DNAJC4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DNAJC4→partner) and Y-score (partner→DNAJC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR6747 →+1.661+3.942<.001.00431
UCECRN7SL575P →+0.261+3.764.008.00331
LUSCRNU6-1312P →+0.261+7.924<.001.00831
LUSCRNU6-508P →+0.269+7.924.001.00831
LUSCRNU4-17P →+0.208+7.924<.001.00831
LUSCMIR329-1 →+0.205+7.924.003.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 45 associations by consensus.

MIR6747 by DNAJC4 expression — UCEC

Box plot of MIR6747 in DNAJC4-low vs DNAJC4-high samples in UCEC.

Explore this box plot interactively →

Exploration