DNAAF3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DNAAF3 mutation is significantly associated with the RNA expression of many other genes, with 1,033 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DNAAF3-associated genes across cancer lineages are PHF5A, NCR1, and KIR3DL1. Each is linked with DNAAF3 in more than 3 cancer types. Because this analysis shows association rather than direction, both DNAAF3-to-partner and partner-to-DNAAF3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PHF5A grouped by DNAAF3-low versus DNAAF3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DNAAF3→partner) and Y-score (partner→DNAAF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPHF5A →+0.424+2.641.006.00534
UCECNCR1 →+0.534+1.939<.001.00933
COADKIR3DL1 →+0.322+3.915<.001.00233
UCECCCL5 →+1.593+3.716<.001<.00133
UCECRPL21P35 →+0.242+2.254<.001<.00133
UCECLINC01871 →+1.517+3.923<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,033 associations by consensus.

PHF5A by DNAAF3 expression — UCEC

Box plot of PHF5A in DNAAF3-low vs DNAAF3-high samples in UCEC.

Explore this box plot interactively →

Exploration