DENND4C

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DENND4C RNA expression is significantly associated with the protein abundance of many other proteins, with 12,016 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible DENND4C-associated proteins across cancer lineages are DENND4C_S741, PSIP1, and CDC37L1. Each is linked with DENND4C in more than 6 cancer types. Because this analysis shows association rather than direction, both DENND4C-to-partner and partner-to-DENND4C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DENND4C versus DENND4C_S741 in HNSC, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (DENND4C→partner) and Y-score (partner→DENND4C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCDENND4C_S741 →+0.553+0.658<.001<.00137
GBMPSIP1 →+0.464+0.375<.001<.00135
OVCDC37L1 →+0.318+0.998<.001<.00135
CCRCCEEF2 →-0.226-0.369<.001<.00135
GBMDENND4C_S1126 →+0.573+0.493<.001<.00135
BRCADENND4C_S1623 →+1.333+0.854<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,016 associations by consensus.

DENND4C vs DENND4C_S741 — HNSC

Per-sample scatter of DENND4C vs DENND4C_S741 in HNSC (Pearson r = 0.34).

Explore this scatter interactively →

Exploration