DDX46

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DDX46 mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible DDX46-associated genes across cancer lineages are ART1, MPC1L, and SSX7. Each is linked with DDX46 in more than 1 cancer types. Because this analysis shows association rather than direction, both DDX46-to-partner and partner-to-DDX46 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ART1 grouped by DDX46-low versus DDX46-high in PANCREAS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DDX46→partner) and Y-score (partner→DDX46) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASART1 →+0.035+4.011<.001.00931
BLOOD_LeukemiaMPC1L →+0.077+4.409<.001.00531
STOMACHSSX7 →+0.325+4.285<.001.00731
SKINHDGFL1 →+0.241+4.273<.001.00631
SKINLCN1 →+0.346+4.095<.001.00931
SKINKRTAP9-1 →+0.035+5.022<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

ART1 by DDX46 expression — PANCREAS

Box plot of ART1 in DDX46-low vs DDX46-high samples in PANCREAS.

Explore this box plot interactively →

Exploration