CYBB

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CYBB mutation is significantly associated with the RNA expression of many other genes, with 4,147 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CYBB-associated genes across cancer lineages are ZNHIT3, PIGW, and CENPH. Each is linked with CYBB in more than 2 cancer types. Because this analysis shows association rather than direction, both CYBB-to-partner and partner-to-CYBB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ZNHIT3 grouped by CYBB-low versus CYBB-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CYBB→partner) and Y-score (partner→CYBB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECZNHIT3 →+0.439+3.065<.001<.00133
UCECPIGW →+0.493+2.379<.001<.00133
UCECCENPH →+0.586+2.110<.001<.00133
UCECCCNB2 →+0.704+3.279<.001<.00133
UCECABHD18 →+0.425+1.868<.001<.00133
UCECMAD2L1 →+0.609+1.999.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,147 associations by consensus.

ZNHIT3 by CYBB expression — UCEC

Box plot of ZNHIT3 in CYBB-low vs CYBB-high samples in UCEC.

Explore this box plot interactively →

Exploration